Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RPL12P3-201ENST00000440080 396 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 GTF3AP5-201ENST00000442645 697 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 DYNLL1P6-201ENST00000503440 264 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 AC005178.1-201ENST00000508392 440 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 MIR3915-201ENST00000578518 97 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 MIR4691-201ENST00000583764 85 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC6A4P31645 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 AC104785.1-201ENST00000603220 588 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 AL353600.1-201ENST00000608148 251 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 AC093799.2-201ENST00000610062 578 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 AL139418.1-201ENST00000613613 177 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 Z99496.1-201ENST00000469424 1477 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC6A4P31645 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SLC6A4P31645 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SLC6A4P31645 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC025263.3-201ENST00000622965 1396 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC6A4P31645 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC6A4P31645 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AP000473.2-201ENST00000602659 1537 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC6A4P31645 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC004158.1-201ENST00000564508 4319 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 MIR550A3-201ENST00000390735 95 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AL109941.1-201ENST00000401925 229 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AL031577.2-201ENST00000404133 280 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC6A4P31645 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC019050.1-201ENST00000418508 492 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AC114814.2-201ENST00000419195 485 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AL022400.1-201ENST00000423946 935 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC6A4P31645 RBMY2QP-201ENST00000429799 1147 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC6A4P31645 PPIAP17-201ENST00000438507 471 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AL360221.1-201ENST00000445989 335 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC6A4P31645 KNOP1P3-201ENST00000446933 426 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC6A4P31645 HMGN2P25-201ENST00000486956 268 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC069304.1-201ENST00000491593 704 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC098799.3-201ENST00000506095 438 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC6A4P31645 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AL121766.1-201ENST00000547436 487 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC019322.1-201ENST00000571869 389 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AF131215.7-201ENST00000602443 707 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AC092653.1-201ENST00000608509 531 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AC073114.1-201ENST00000612027 490 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AP003072.4-201ENST00000624580 310 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SLC6A4P31645 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
SLC6A4P31645 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC6A4P31645 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AL390237.1-201ENST00000404226 1415 ntBASIC5.29□□□□□ -1.56
SLC6A4P31645 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC6A4P31645 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC6A4P31645 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC6A4P31645 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC6A4P31645 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SLC6A4P31645 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC6A4P31645 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC6A4P31645 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC6A4P31645 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.28□□□□□ -1.56
SLC6A4P31645 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SLC6A4P31645 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC6A4P31645 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC6A4P31645 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC6A4P31645 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SLC6A4P31645 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms