Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPS27AP7-201ENST00000422792 455 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC3P19447 AC079922.1-201ENST00000443291 359 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 AC005297.1-201ENST00000444765 862 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.72□□□□□ -1.33
ERCC3P19447 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC3P19447 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC3P19447 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 MTCO3P2-201ENST00000457365 171 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 AL133445.1-201ENST00000467051 452 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 RPL30P11-201ENST00000495304 339 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 BNIP3P41-201ENST00000503774 571 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.72□□□□□ -1.33
ERCC3P19447 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.72□□□□□ -1.33
ERCC3P19447 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC3P19447 AC097486.1-201ENST00000515331 210 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 RNA5SP34-201ENST00000516887 130 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.72□□□□□ -1.33
ERCC3P19447 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC3P19447 AC007494.1-201ENST00000562293 760 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 AC090651.1-201ENST00000567865 634 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 MIR5186-201ENST00000577504 120 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 MAGOH2P-202ENST00000584384 429 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 AC083760.1-201ENST00000589621 670 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 AC107304.1-201ENST00000604229 296 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.72□□□□□ -1.33
ERCC3P19447 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 AC138932.5-201ENST00000617759 563 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ERCC3P19447 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
ERCC3P19447 AP000473.2-201ENST00000602659 1537 ntBASIC6.71□□□□□ -1.33
ERCC3P19447 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ERCC3P19447 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
ERCC3P19447 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
ERCC3P19447 RNU5F-6P-201ENST00000362979 116 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 RNU4-91P-201ENST00000364778 135 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
ERCC3P19447 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.71□□□□□ -1.34
ERCC3P19447 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 VN1R8P-201ENST00000407739 893 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 MIR320C1-201ENST00000408566 88 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC3P19447 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 AL139128.1-201ENST00000413921 941 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 RPS7P13-201ENST00000413955 498 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.71□□□□□ -1.34
ERCC3P19447 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.71□□□□□ -1.34
ERCC3P19447 GNG5P5-201ENST00000420444 220 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 RPL7P30-201ENST00000420888 709 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AL133325.1-201ENST00000421090 382 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AC099336.2-201ENST00000422457 254 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC3P19447 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC3P19447 CLUHP1-201ENST00000435012 1190 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AC012075.1-201ENST00000436549 580 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC3P19447 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC3P19447 AC099560.2-201ENST00000457554 255 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 snoU13.29-201ENST00000459370 104 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 PPIAP21-201ENST00000464473 501 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 RN7SL799P-201ENST00000475891 298 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.71□□□□□ -1.34
ERCC3P19447 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC3P19447 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC3P19447 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC3P19447 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.71□□□□□ -1.34
ERCC3P19447 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC3P19447 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 MIR132-201ENST00000591554 101 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.71□□□□□ -1.34
ERCC3P19447 AC091805.2-201ENST00000603848 235 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 Z99129.1-201ENST00000612510 255 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC3P19447 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.71□□□□□ -1.34
ERCC3P19447 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC3P19447 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC3P19447 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.71□□□□□ -1.34
ERCC3P19447 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC3P19447 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms