Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SOD2P1-201ENST00000396543 562 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 RPL7P60-201ENST00000397636 735 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 CBX1P3-201ENST00000413296 527 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.13□□□□□ -1.59
COL5A2P05997 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.13□□□□□ -1.59
COL5A2P05997 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC073387.1-201ENST00000453261 709 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 RPL21P11-201ENST00000461458 483 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC012158.1-204ENST00000483430 465 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.13□□□□□ -1.59
COL5A2P05997 RN7SKP13-201ENST00000515933 244 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.13□□□□□ -1.59
COL5A2P05997 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC107016.1-201ENST00000550463 337 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC015922.4-201ENST00000612568 690 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC243312.2-201ENST00000623340 601 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL5A2P05997 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 MARK2P15-201ENST00000432204 2186 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL5A2P05997 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.12□□□□□ -1.59
COL5A2P05997 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 AP001284.1-201ENST00000528393 2118 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL5A2P05997 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
COL5A2P05997 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL5A2P05997 RN7SKP177-201ENST00000410567 355 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 AL158156.1-201ENST00000422509 473 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 AC073335.1-201ENST00000427776 363 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 CYCSP4-201ENST00000429682 331 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL5A2P05997 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.12□□□□□ -1.59
COL5A2P05997 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.12□□□□□ -1.59
COL5A2P05997 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 AC006518.1-201ENST00000541449 943 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 AC105036.1-201ENST00000566222 271 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.12□□□□□ -1.59
COL5A2P05997 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.12□□□□□ -1.59
COL5A2P05997 AC020914.6-201ENST00000594327 272 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 AL021368.1-201ENST00000607490 540 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.12□□□□□ -1.59
COL5A2P05997 AL392088.2-201ENST00000637607 285 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 AC119674.1-207ENST00000641355 633 ntBASIC5.12□□□□□ -1.59
COL5A2P05997 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL5A2P05997 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.11□□□□□ -1.59
COL5A2P05997 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.11□□□□□ -1.59
COL5A2P05997 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL5A2P05997 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL5A2P05997 AC096664.2-201ENST00000411843 406 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 AL390879.2-203ENST00000426943 1121 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.11□□□□□ -1.59
COL5A2P05997 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.11□□□□□ -1.59
COL5A2P05997 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 BX510359.1-201ENST00000456973 237 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 APOOP2-201ENST00000461561 539 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 RN7SL601P-201ENST00000471221 293 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.11□□□□□ -1.59
COL5A2P05997 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.11□□□□□ -1.59
COL5A2P05997 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.11□□□□□ -1.59
COL5A2P05997 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.11□□□□□ -1.59
COL5A2P05997 RNU6-362P-201ENST00000516736 90 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.11□□□□□ -1.59
COL5A2P05997 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.11□□□□□ -1.59
COL5A2P05997 AC104662.1-201ENST00000604448 511 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.11□□□□□ -1.59
COL5A2P05997 Z95327.2-201ENST00000414579 1873 ntBASIC5.11□□□□□ -1.59
COL5A2P05997 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL5A2P05997 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL5A2P05997 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL5A2P05997 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL5A2P05997 AL079305.1-201ENST00000623159 3008 ntBASIC5.1□□□□□ -1.59
COL5A2P05997 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
COL5A2P05997 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL5A2P05997 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
COL5A2P05997 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.1□□□□□ -1.59
COL5A2P05997 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.1□□□□□ -1.59
COL5A2P05997 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.1□□□□□ -1.59
COL5A2P05997 RANP8-201ENST00000444720 713 ntBASIC5.1□□□□□ -1.59
COL5A2P05997 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.1□□□□□ -1.59
COL5A2P05997 AC017099.1-201ENST00000448261 1028 ntBASIC5.1□□□□□ -1.59
COL5A2P05997 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.1□□□□□ -1.59
COL5A2P05997 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.1□□□□□ -1.59
COL5A2P05997 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.1□□□□□ -1.59
COL5A2P05997 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL5A2P05997 AC100770.1-201ENST00000532310 322 ntBASIC5.1□□□□□ -1.59
COL5A2P05997 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms