Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
SGCEO43556 AC073429.2-201ENST00000569694 1444 ntBASIC3.78□□□□□ -1.8
SGCEO43556 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SGCEO43556 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SGCEO43556 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SGCEO43556 AC090229.1-201ENST00000590983 1609 ntBASIC3.78□□□□□ -1.8
SGCEO43556 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SGCEO43556 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
SGCEO43556 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SGCEO43556 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SGCEO43556 XIAPP3-201ENST00000312918 795 ntBASIC3.78□□□□□ -1.8
SGCEO43556 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.78□□□□□ -1.8
SGCEO43556 SNORA62.2-201ENST00000364672 152 ntBASIC3.78□□□□□ -1.8
SGCEO43556 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SGCEO43556 RPL23AP59-201ENST00000399415 461 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.78□□□□□ -1.8
SGCEO43556 AL161631.1-201ENST00000417933 486 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AL139095.3-201ENST00000419672 1203 ntBASIC3.78□□□□□ -1.8
SGCEO43556 CNOT7P1-201ENST00000429006 852 ntBASIC3.78□□□□□ -1.8
SGCEO43556 FTH1P6-201ENST00000430768 320 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AL392003.1-201ENST00000434394 243 ntBASIC3.78□□□□□ -1.8
SGCEO43556 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.78□□□□□ -1.8
SGCEO43556 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.78□□□□□ -1.8
SGCEO43556 RN7SL810P-201ENST00000493031 276 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.78□□□□□ -1.8
SGCEO43556 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.78□□□□□ -1.8
SGCEO43556 AC025857.1-201ENST00000525252 377 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AL109741.3-201ENST00000561748 592 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AC021483.2-201ENST00000567415 758 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AC141257.3-201ENST00000572906 215 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.78□□□□□ -1.8
SGCEO43556 MIR4715-201ENST00000584117 79 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.78□□□□□ -1.8
SGCEO43556 uc_338.9-201ENST00000617424 182 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AC140479.6-201ENST00000633535 357 ntBASIC3.78□□□□□ -1.8
SGCEO43556 AC119674.1-212ENST00000641155 993 ntBASIC3.78□□□□□ -1.8
SGCEO43556 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.78□□□□□ -1.8
SGCEO43556 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SGCEO43556 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SGCEO43556 AL136964.1-201ENST00000622038 2990 ntBASIC3.78□□□□□ -1.81
SGCEO43556 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.78□□□□□ -1.81
SGCEO43556 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
SGCEO43556 MFSD8-216ENST00000641147 4009 ntBASIC3.77□□□□□ -1.81
SGCEO43556 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
SGCEO43556 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.77□□□□□ -1.81
SGCEO43556 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SGCEO43556 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.77□□□□□ -1.81
SGCEO43556 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SGCEO43556 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
SGCEO43556 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SGCEO43556 SNORD66.1-201ENST00000391230 76 ntBASIC3.77□□□□□ -1.81
SGCEO43556 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.77□□□□□ -1.81
SGCEO43556 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SGCEO43556 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.77□□□□□ -1.81
SGCEO43556 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.77□□□□□ -1.81
SGCEO43556 AC010740.1-201ENST00000417035 684 ntBASIC3.77□□□□□ -1.81
SGCEO43556 RPA2P2-201ENST00000419698 796 ntBASIC3.77□□□□□ -1.81
SGCEO43556 RPL7P53-201ENST00000421245 739 ntBASIC3.77□□□□□ -1.81
SGCEO43556 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.77□□□□□ -1.81
SGCEO43556 BMS1P19-201ENST00000433925 393 ntBASIC3.77□□□□□ -1.81
SGCEO43556 HLA-N-201ENST00000437516 135 ntBASIC3.77□□□□□ -1.81
SGCEO43556 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.77□□□□□ -1.81
SGCEO43556 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.77□□□□□ -1.81
SGCEO43556 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.77□□□□□ -1.81
SGCEO43556 Z95152.1-201ENST00000453556 656 ntBASIC3.77□□□□□ -1.81
SGCEO43556 snoU13.1-201ENST00000459157 104 ntBASIC3.77□□□□□ -1.81
SGCEO43556 RN7SL98P-201ENST00000462271 300 ntBASIC3.77□□□□□ -1.81
SGCEO43556 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.77□□□□□ -1.81
SGCEO43556 AC011037.1-201ENST00000483964 558 ntBASIC3.77□□□□□ -1.81
SGCEO43556 NIPA2P2-201ENST00000496376 1083 ntBASIC3.77□□□□□ -1.81
SGCEO43556 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.77□□□□□ -1.81
SGCEO43556 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.77□□□□□ -1.81
SGCEO43556 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
SGCEO43556 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.77□□□□□ -1.81
SGCEO43556 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.77□□□□□ -1.81
SGCEO43556 AL360157.1-201ENST00000565962 87 ntBASIC3.77□□□□□ -1.81
SGCEO43556 AC068020.1-201ENST00000594215 661 ntBASIC3.77□□□□□ -1.81
SGCEO43556 AC139769.3-201ENST00000618383 175 ntBASIC3.77□□□□□ -1.81
SGCEO43556 AP000843.1-201ENST00000624880 701 ntBASIC3.77□□□□□ -1.81
SGCEO43556 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.77□□□□□ -1.81
SGCEO43556 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SGCEO43556 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SGCEO43556 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SGCEO43556 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.77□□□□□ -1.81
SGCEO43556 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SGCEO43556 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.76□□□□□ -1.81
SGCEO43556 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
SGCEO43556 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.76□□□□□ -1.81
SGCEO43556 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SGCEO43556 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SGCEO43556 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.76□□□□□ -1.81
SGCEO43556 AL139811.1-201ENST00000424779 2299 ntBASIC3.76□□□□□ -1.81
SGCEO43556 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.76□□□□□ -1.81
SGCEO43556 RNA5SP447-201ENST00000363749 119 ntBASIC3.76□□□□□ -1.81
SGCEO43556 RNU6-532P-201ENST00000384318 107 ntBASIC3.76□□□□□ -1.81
SGCEO43556 MIR585-201ENST00000384887 94 ntBASIC3.76□□□□□ -1.81
SGCEO43556 MIR937-201ENST00000401271 86 ntBASIC3.76□□□□□ -1.81
SGCEO43556 RPL37P18-201ENST00000411602 243 ntBASIC3.76□□□□□ -1.81
SGCEO43556 AC092647.1-201ENST00000420654 287 ntBASIC3.76□□□□□ -1.81
SGCEO43556 AL512326.1-201ENST00000443050 721 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms