Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM38O00635 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM38O00635 RPS4XP12-201ENST00000461747 709 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 RPS3AP41-201ENST00000462701 778 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AC006511.1-201ENST00000470614 315 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 PRDX3P4-201ENST00000470828 747 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 RAP1BP2-201ENST00000478270 544 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 RPL23AP44-201ENST00000482216 473 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AC083982.1-201ENST00000485679 344 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM38O00635 AC008885.2-201ENST00000509506 930 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AC011352.1-201ENST00000512300 793 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM38O00635 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM38O00635 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM38O00635 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM38O00635 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 AC093591.2-201ENST00000565254 3843 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM38O00635 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM38O00635 PCNAP1-202ENST00000595299 752 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AC244107.2-201ENST00000611773 76 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AL592148.2-201ENST00000612210 372 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
TRIM38O00635 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM38O00635 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM38O00635 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM38O00635 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM38O00635 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
TRIM38O00635 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM38O00635 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 SMG1P4-204ENST00000523028 4131 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 ATP5F1P2-201ENST00000398143 760 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 HSPA8P15-201ENST00000401676 786 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 TMSB4XP8-201ENST00000402089 135 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM38O00635 Y_RNA.599-201ENST00000410489 109 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 OR51A3P-201ENST00000413596 924 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 TMSB4XP6-201ENST00000415187 135 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AL513175.2-201ENST00000422071 443 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AC104333.2-201ENST00000422630 192 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 TMSB4XP1-201ENST00000424567 135 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AC104837.2-201ENST00000427236 424 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM38O00635 PRELID3BP10-201ENST00000431957 584 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 GSTA7P-201ENST00000438425 448 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AC073052.1-201ENST00000440417 714 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM38O00635 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM38O00635 AL591363.1-201ENST00000450091 483 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 snoU13.20-201ENST00000459180 104 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC104689.1-201ENST00000473356 768 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 RPL5P22-201ENST00000480199 884 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AC058823.1-201ENST00000485315 474 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM38O00635 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC023632.1-201ENST00000518463 375 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRIM38O00635 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM38O00635 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC018552.3-201ENST00000567416 561 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AP005136.1-201ENST00000579765 429 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM38O00635 MIR3936-201ENST00000584304 110 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC087783.2-201ENST00000605070 562 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AC096553.1-201ENST00000605169 829 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AP004247.3-201ENST00000608682 624 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 AC009237.15-201ENST00000610252 501 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 MIR6839-201ENST00000620425 113 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms