Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC188H7C350 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC188H7C350 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC188H7C350 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC188H7C350 RPEP2-201ENST00000432149 701 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AL049745.1-201ENST00000433953 286 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AL627308.1-201ENST00000435693 821 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC188H7C350 RPL23AP43-201ENST00000446445 471 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC188H7C350 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC188H7C350 AC008379.1-201ENST00000463655 464 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AL161747.1-201ENST00000480068 358 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC188H7C350 NIP7P2-201ENST00000485801 544 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AC008565.1-201ENST00000509046 885 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AC121161.1-201ENST00000510606 652 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC188H7C350 RN7SKP276-201ENST00000516242 268 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC188H7C350 COX6B1P6-201ENST00000522347 255 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC188H7C350 AP000916.1-201ENST00000533869 835 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AC027104.1-201ENST00000563702 681 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 MTND4LP24-201ENST00000572277 291 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC188H7C350 MIR1269B-201ENST00000580405 75 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC188H7C350 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC188H7C350 CDRT1-208ENST00000630868 794 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC188H7C350 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC188H7C350 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC188H7C350 ASNSP1-201ENST00000518311 1939 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 MTCO1P4-201ENST00000520516 1409 ntBASIC4.61□□□□□ -1.67
CCDC188H7C350 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC188H7C350 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC188H7C350 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC188H7C350 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC188H7C350 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC188H7C350 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC188H7C350 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC188H7C350 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CCDC188H7C350 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC188H7C350 RNA5SP388-201ENST00000362584 119 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 RN7SKP100-201ENST00000411258 284 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC188H7C350 NANOGP6-201ENST00000429190 847 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AC005154.2-201ENST00000438110 379 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 snoU13.20-201ENST00000459180 104 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 RN7SL610P-201ENST00000463845 291 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AC017037.1-201ENST00000508460 471 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 HNRNPKP5-201ENST00000515300 253 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AC010306.1-201ENST00000523223 1117 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC188H7C350 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 AC068446.3-201ENST00000555285 382 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AC090312.1-201ENST00000580637 348 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 AL512782.1-201ENST00000603093 364 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AL133338.2-201ENST00000604292 736 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 AC006946.3-201ENST00000609791 756 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AP005229.2-201ENST00000609980 697 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AC100847.1-201ENST00000611316 481 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC188H7C350 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC188H7C350 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC188H7C350 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC188H7C350 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC188H7C350 AL445437.1-201ENST00000623157 3087 ntBASIC4.6□□□□□ -1.67
CCDC188H7C350 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC188H7C350 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC188H7C350 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC188H7C350 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC188H7C350 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC188H7C350 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC188H7C350 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC188H7C350 RNA5SP123-201ENST00000363244 119 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CCDC188H7C350 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC188H7C350 MIR525-201ENST00000384978 85 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 MTND4P26-201ENST00000415971 1359 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC188H7C350 RPS12P10-201ENST00000427031 377 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC188H7C350 UBE2V1P3-201ENST00000439651 417 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 RPL23AP93-201ENST00000440847 484 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms