Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 HLA-N-201ENST00000437516 135 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 RN7SL585P-201ENST00000470538 280 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC006517.1-201ENST00000480485 328 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 RNU6-319P-201ENST00000516025 108 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 SNORA70.17-201ENST00000516449 133 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 CYP4A43P-201ENST00000568156 121 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC034105.4-201ENST00000568304 277 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC007599.1-201ENST00000568688 1174 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC006130.2-201ENST00000586202 326 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AL592436.1-201ENST00000605135 558 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AL031666.3-201ENST00000609320 1006 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC015722.2-201ENST00000622210 551 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC008785.1-201ENST00000624475 456 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC104118.1-201ENST00000607625 1589 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC017104.4-201ENST00000636283 1592 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC104297.1-201ENST00000393779 870 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 RNA5SP296-201ENST00000410523 111 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 FABP3P2-201ENST00000453169 399 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 MTND3P4-201ENST00000453537 303 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 RN7SL132P-201ENST00000478131 296 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 PPBPP1-201ENST00000510807 373 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 MTND4LP31-201ENST00000514859 294 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC018442.3-201ENST00000523025 183 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AL121834.1-201ENST00000572284 509 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC006272.2-201ENST00000594725 163 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AC099669.2-201ENST00000616549 437 ntBASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SMIM28A0A1B0GU29 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 OR5T3-201ENST00000303059 1023 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 RNA5SP399-201ENST00000364003 117 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 MIR7-1-201ENST00000384871 110 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 RN7SKP97-201ENST00000410966 333 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 TCEA1P4-201ENST00000415066 844 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 MTCO1P45-201ENST00000431457 267 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 CCRL1P1-201ENST00000449542 1053 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AL591363.1-201ENST00000450091 483 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 RNA5SP179-201ENST00000517284 121 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms