Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Gm16061-201ENSMUST00000122167 857 ntBASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClcnkaQ9WUB7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Gm13474-201ENSMUST00000122466 815 ntBASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ClcnkaQ9WUB7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClcnkaQ9WUB7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms