Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 SMG8-203ENST00000578922 2178 ntBASIC19.27■□□□□ 0.68
SPASTQ9UBP0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 AC026271.3-201ENST00000571884 352 ntBASIC19.27■□□□□ 0.68
SPASTQ9UBP0 MIR6786-201ENST00000616843 113 ntBASIC19.27■□□□□ 0.68
SPASTQ9UBP0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPASTQ9UBP0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SPASTQ9UBP0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.27■□□□□ 0.67
SPASTQ9UBP0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
SPASTQ9UBP0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 RCN1P1-201ENST00000400413 996 ntBASIC19.26■□□□□ 0.67
SPASTQ9UBP0 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.26■□□□□ 0.67
SPASTQ9UBP0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 FITM1-202ENST00000559294 800 ntBASIC19.26■□□□□ 0.67
SPASTQ9UBP0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 AC145285.6-201ENST00000604632 637 ntBASIC19.26■□□□□ 0.67
SPASTQ9UBP0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.26■□□□□ 0.67
SPASTQ9UBP0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.26■□□□□ 0.67
SPASTQ9UBP0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPASTQ9UBP0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 AC099778.1-201ENST00000568593 1911 ntBASIC19.25■□□□□ 0.67
SPASTQ9UBP0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 NAPSB-206ENST00000562112 1266 ntBASIC19.25■□□□□ 0.67
SPASTQ9UBP0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPASTQ9UBP0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.24■□□□□ 0.67
SPASTQ9UBP0 AC131212.4-201ENST00000623606 975 ntBASIC19.24■□□□□ 0.67
SPASTQ9UBP0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms