Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Gm37641-201ENSMUST00000193837 239 ntBASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.95■□□□□ 0.3
Msh5Q9QUM7 AC159246.1-201ENSMUST00000214478 249 ntBASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Gm38027-201ENSMUST00000192315 235 ntBASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Gm10252-201ENSMUST00000209541 832 ntBASIC16.94■□□□□ 0.3
Msh5Q9QUM7 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.94■□□□□ 0.3
Msh5Q9QUM7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Gm13366-201ENSMUST00000122198 970 ntBASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Gm17661-201ENSMUST00000170317 270 ntBASIC16.93■□□□□ 0.3
Msh5Q9QUM7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 AC106830.1-201ENSMUST00000228032 1003 ntBASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh5Q9QUM7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Gm37025-201ENSMUST00000195159 829 ntBASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms