Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mbd3l1Q9D9H3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Mbd3l1Q9D9H3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Gm12366-201ENSMUST00000121722 873 ntBASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Gm5786-201ENSMUST00000085368 882 ntBASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3l1Q9D9H3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3l1Q9D9H3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3l1Q9D9H3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms