Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska1Q9CPV1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska1Q9CPV1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ska1Q9CPV1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ska1Q9CPV1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska1Q9CPV1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ska1Q9CPV1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ska1Q9CPV1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Gm5643-201ENSMUST00000117081 966 ntBASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska1Q9CPV1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Gm20760-201ENSMUST00000179197 648 ntBASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska1Q9CPV1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ska1Q9CPV1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Gm10517-202ENSMUST00000192970 758 ntBASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ska1Q9CPV1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ska1Q9CPV1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ska1Q9CPV1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ska1Q9CPV1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ska1Q9CPV1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ska1Q9CPV1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ska1Q9CPV1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ska1Q9CPV1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ska1Q9CPV1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms