Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RtcbQ99LF4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RtcbQ99LF4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RtcbQ99LF4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RtcbQ99LF4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RtcbQ99LF4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
RtcbQ99LF4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RtcbQ99LF4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.45■□□□□ 0.86
RtcbQ99LF4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RtcbQ99LF4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.45■□□□□ 0.86
RtcbQ99LF4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.45■□□□□ 0.86
RtcbQ99LF4 Gm8655-201ENSMUST00000221159 852 ntBASIC20.45■□□□□ 0.86
RtcbQ99LF4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.45■□□□□ 0.86
RtcbQ99LF4 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.45■□□□□ 0.86
RtcbQ99LF4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RtcbQ99LF4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.44■□□□□ 0.86
RtcbQ99LF4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RtcbQ99LF4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RtcbQ99LF4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RtcbQ99LF4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.42■□□□□ 0.86
RtcbQ99LF4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.42■□□□□ 0.86
RtcbQ99LF4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Gm7222-201ENSMUST00000117512 906 ntBASIC20.42■□□□□ 0.86
RtcbQ99LF4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RtcbQ99LF4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.41■□□□□ 0.86
RtcbQ99LF4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.41■□□□□ 0.86
RtcbQ99LF4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RtcbQ99LF4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms