Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.53■□□□□ 0.24
Cstf1Q99LC2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.53■□□□□ 0.24
Cstf1Q99LC2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Mir5126-201ENSMUST00000175513 77 ntBASIC16.52■□□□□ 0.24
Cstf1Q99LC2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cstf1Q99LC2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cstf1Q99LC2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cstf1Q99LC2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cstf1Q99LC2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Gm29707-201ENSMUST00000196325 491 ntBASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cstf1Q99LC2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Gm2756-201ENSMUST00000195851 400 ntBASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.5■□□□□ 0.23
Cstf1Q99LC2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Gm12260-201ENSMUST00000122447 411 ntBASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms