Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfc4Q99J62 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.08■□□□□ 0.65
Rfc4Q99J62 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.08■□□□□ 0.64
Rfc4Q99J62 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.07■□□□□ 0.64
Rfc4Q99J62 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfc4Q99J62 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rfc4Q99J62 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Gm8000-201ENSMUST00000188378 592 ntBASIC19.06■□□□□ 0.64
Rfc4Q99J62 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfc4Q99J62 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Gm12350-201ENSMUST00000121208 462 ntBASIC19.05■□□□□ 0.64
Rfc4Q99J62 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.05■□□□□ 0.64
Rfc4Q99J62 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfc4Q99J62 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Rfc4Q99J62 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfc4Q99J62 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms