Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smc1bQ920F6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.09■□□□□ 0.65
Smc1bQ920F6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.08■□□□□ 0.65
Smc1bQ920F6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc1bQ920F6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Smc1bQ920F6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc1bQ920F6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc1bQ920F6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smc1bQ920F6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
Smc1bQ920F6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc1bQ920F6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Smc1bQ920F6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.08■□□□□ 0.64
Smc1bQ920F6 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.08■□□□□ 0.64
Smc1bQ920F6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Smc1bQ920F6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc1bQ920F6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc1bQ920F6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smc1bQ920F6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc1bQ920F6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Smc1bQ920F6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc1bQ920F6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc1bQ920F6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc1bQ920F6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.07■□□□□ 0.64
Smc1bQ920F6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Smc1bQ920F6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.06■□□□□ 0.64
Smc1bQ920F6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc1bQ920F6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Gm15794-201ENSMUST00000120182 631 ntBASIC19.05■□□□□ 0.64
Smc1bQ920F6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Gm37935-201ENSMUST00000192012 982 ntBASIC19.05■□□□□ 0.64
Smc1bQ920F6 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.05■□□□□ 0.64
Smc1bQ920F6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc1bQ920F6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Gm12895-201ENSMUST00000122214 226 ntBASIC19.04■□□□□ 0.64
Smc1bQ920F6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Gm18195-201ENSMUST00000207604 706 ntBASIC19.04■□□□□ 0.64
Smc1bQ920F6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc1bQ920F6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms