Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Odf4Q8VI88 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Odf4Q8VI88 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Odf4Q8VI88 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Odf4Q8VI88 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Odf4Q8VI88 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Odf4Q8VI88 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Odf4Q8VI88 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Odf4Q8VI88 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Odf4Q8VI88 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Odf4Q8VI88 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Odf4Q8VI88 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Gm27463-201ENSMUST00000183569 57 ntBASIC14.86□□□□□ -0.03
Odf4Q8VI88 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Odf4Q8VI88 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Odf4Q8VI88 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Odf4Q8VI88 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Odf4Q8VI88 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.85□□□□□ -0.03
Odf4Q8VI88 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.84□□□□□ -0.03
Odf4Q8VI88 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Gm18959-201ENSMUST00000208954 655 ntBASIC14.84□□□□□ -0.03
Odf4Q8VI88 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Odf4Q8VI88 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms