Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Gm17661-201ENSMUST00000170317 270 ntBASIC13.58□□□□□ -0.24
Nup35Q8R4R6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Gm42569-201ENSMUST00000200539 472 ntBASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Gm11249-201ENSMUST00000117071 859 ntBASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Gm10517-202ENSMUST00000192970 758 ntBASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Gm42545-201ENSMUST00000202755 922 ntBASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup35Q8R4R6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nup35Q8R4R6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Gm37025-201ENSMUST00000195159 829 ntBASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms