Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tmc1Q8R4P5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmc1Q8R4P5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmc1Q8R4P5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tmc1Q8R4P5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.33■□□□□ 0.85
Tmc1Q8R4P5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmc1Q8R4P5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tmc1Q8R4P5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmc1Q8R4P5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.33■□□□□ 0.84
Tmc1Q8R4P5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmc1Q8R4P5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmc1Q8R4P5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmc1Q8R4P5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Tmc1Q8R4P5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmc1Q8R4P5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmc1Q8R4P5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmc1Q8R4P5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmc1Q8R4P5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Mir5122-201ENSMUST00000175004 89 ntBASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmc1Q8R4P5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC20.3■□□□□ 0.84
Tmc1Q8R4P5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 Gm27000-201ENSMUST00000182943 842 ntBASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmc1Q8R4P5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 Gm18025-201ENSMUST00000221733 862 ntBASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.28■□□□□ 0.84
Tmc1Q8R4P5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tmc1Q8R4P5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms