Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.82■□□□□ 0.28
Slf1Q8R3P9 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slf1Q8R3P9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.8■□□□□ 0.28
Slf1Q8R3P9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slf1Q8R3P9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Gm2559-201ENSMUST00000201323 363 ntBASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.79■□□□□ 0.28
Slf1Q8R3P9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Gm11927-201ENSMUST00000118472 759 ntBASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms