Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn1Q8K0T0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.14■□□□□ 0.66
Rtn1Q8K0T0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rtn1Q8K0T0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.14■□□□□ 0.66
Rtn1Q8K0T0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rtn1Q8K0T0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn1Q8K0T0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn1Q8K0T0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Rtn1Q8K0T0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Gm29707-201ENSMUST00000196325 491 ntBASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Haglr-201ENSMUST00000100000 2085 ntBASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn1Q8K0T0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn1Q8K0T0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rtn1Q8K0T0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
Rtn1Q8K0T0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms