Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps50Q8CI71 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps50Q8CI71 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.31■□□□□ 0.2
Vps50Q8CI71 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.31■□□□□ 0.2
Vps50Q8CI71 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.31■□□□□ 0.2
Vps50Q8CI71 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps50Q8CI71 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps50Q8CI71 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Mir8112-201ENSMUST00000184382 131 ntBASIC16.3■□□□□ 0.2
Vps50Q8CI71 Gm29791-202ENSMUST00000207888 369 ntBASIC16.3■□□□□ 0.2
Vps50Q8CI71 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps50Q8CI71 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps50Q8CI71 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Vps50Q8CI71 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms