Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccdc28aQ8CEI3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28aQ8CEI3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28aQ8CEI3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc28aQ8CEI3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28aQ8CEI3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28aQ8CEI3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccdc28aQ8CEI3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccdc28aQ8CEI3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28aQ8CEI3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc28aQ8CEI3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc28aQ8CEI3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ccdc28aQ8CEI3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28aQ8CEI3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28aQ8CEI3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28aQ8CEI3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms