Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Eri3Q8C460 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Eri3Q8C460 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Eri3Q8C460 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Eri3Q8C460 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Eri3Q8C460 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Eri3Q8C460 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Eri3Q8C460 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Eri3Q8C460 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Eri3Q8C460 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Eri3Q8C460 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Eri3Q8C460 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Eri3Q8C460 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.77■□□□□ 0.12
Eri3Q8C460 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Eri3Q8C460 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Eri3Q8C460 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Eri3Q8C460 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Eri3Q8C460 Gm10013-201ENSMUST00000106074 672 ntBASIC15.77■□□□□ 0.12
Eri3Q8C460 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.77■□□□□ 0.12
Eri3Q8C460 Gm18115-201ENSMUST00000221209 621 ntBASIC15.77■□□□□ 0.12
Eri3Q8C460 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Eri3Q8C460 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
Eri3Q8C460 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Eri3Q8C460 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Eri3Q8C460 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Eri3Q8C460 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Eri3Q8C460 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Eri3Q8C460 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Eri3Q8C460 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Eri3Q8C460 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Eri3Q8C460 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Eri3Q8C460 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Eri3Q8C460 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Eri3Q8C460 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.77■□□□□ 0.11
Eri3Q8C460 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Eri3Q8C460 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.76■□□□□ 0.11
Eri3Q8C460 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Eri3Q8C460 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Eri3Q8C460 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Eri3Q8C460 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Eri3Q8C460 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.76■□□□□ 0.11
Eri3Q8C460 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.75■□□□□ 0.11
Eri3Q8C460 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Eri3Q8C460 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Eri3Q8C460 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Eri3Q8C460 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Eri3Q8C460 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Eri3Q8C460 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Eri3Q8C460 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Eri3Q8C460 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Eri3Q8C460 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Eri3Q8C460 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Eri3Q8C460 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms