Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.05■□□□□ 0.32
Suds3Q8BR65 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.05■□□□□ 0.32
Suds3Q8BR65 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.05■□□□□ 0.32
Suds3Q8BR65 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Suds3Q8BR65 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.05■□□□□ 0.32
Suds3Q8BR65 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Suds3Q8BR65 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.04■□□□□ 0.32
Suds3Q8BR65 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Suds3Q8BR65 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Suds3Q8BR65 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.04■□□□□ 0.32
Suds3Q8BR65 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Suds3Q8BR65 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Gm7638-201ENSMUST00000121348 967 ntBASIC17.03■□□□□ 0.32
Suds3Q8BR65 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Gm27463-201ENSMUST00000183569 57 ntBASIC17.03■□□□□ 0.32
Suds3Q8BR65 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Suds3Q8BR65 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.02■□□□□ 0.32
Suds3Q8BR65 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Gm37025-201ENSMUST00000195159 829 ntBASIC17.02■□□□□ 0.32
Suds3Q8BR65 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Suds3Q8BR65 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.02■□□□□ 0.31
Suds3Q8BR65 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.02■□□□□ 0.31
Suds3Q8BR65 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Suds3Q8BR65 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Suds3Q8BR65 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Suds3Q8BR65 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms