Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Mir1668-201ENSMUST00000184114 107 ntBASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Gm7213-201ENSMUST00000215977 950 ntBASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip4Q8BQP8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip4Q8BQP8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab11fip4Q8BQP8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab11fip4Q8BQP8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab11fip4Q8BQP8 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.33■□□□□ 0.53
Rab11fip4Q8BQP8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab11fip4Q8BQP8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rab11fip4Q8BQP8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms