Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3bQ80YF6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Gm27000-201ENSMUST00000182943 842 ntBASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Gm10602-201ENSMUST00000098239 609 ntBASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3bQ80YF6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Gm27275-201ENSMUST00000184318 272 ntBASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms