Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim36Q80WG7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.05■□□□□ 0.16
Trim36Q80WG7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim36Q80WG7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim36Q80WG7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.03■□□□□ 0.16
Trim36Q80WG7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.03■□□□□ 0.16
Trim36Q80WG7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim36Q80WG7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.02■□□□□ 0.16
Trim36Q80WG7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.02■□□□□ 0.16
Trim36Q80WG7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Gm30025-201ENSMUST00000218555 728 ntBASIC16.02■□□□□ 0.16
Trim36Q80WG7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim36Q80WG7 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.02■□□□□ 0.16
Trim36Q80WG7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim36Q80WG7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim36Q80WG7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim36Q80WG7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.01■□□□□ 0.15
Trim36Q80WG7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.01■□□□□ 0.15
Trim36Q80WG7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.01■□□□□ 0.15
Trim36Q80WG7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim36Q80WG7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms