Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rfx4Q7TNK1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rfx4Q7TNK1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Gm10849-201ENSMUST00000100397 618 ntBASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Gm4974-201ENSMUST00000209974 875 ntBASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rfx4Q7TNK1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rfx4Q7TNK1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rfx4Q7TNK1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Rfx4Q7TNK1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Gm18284-201ENSMUST00000172604 624 ntBASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms