Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt42Q6IFX2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt42Q6IFX2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt42Q6IFX2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Krt42Q6IFX2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt42Q6IFX2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt42Q6IFX2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Gm15375-201ENSMUST00000119510 849 ntBASIC17.08■□□□□ 0.32
Krt42Q6IFX2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt42Q6IFX2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Gm10138-203ENSMUST00000206952 366 ntBASIC17.07■□□□□ 0.32
Krt42Q6IFX2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt42Q6IFX2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 AV356131-201ENSMUST00000206201 750 ntBASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt42Q6IFX2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Gm7290-201ENSMUST00000104990 617 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms