Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox16Q62247 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
Sox16Q62247 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC9.42□□□□□ -0.9
Sox16Q62247 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox16Q62247 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox16Q62247 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox16Q62247 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC9.42□□□□□ -0.9
Sox16Q62247 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Sox16Q62247 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox16Q62247 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox16Q62247 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox16Q62247 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox16Q62247 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC9.41□□□□□ -0.9
Sox16Q62247 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Sox16Q62247 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC9.41□□□□□ -0.9
Sox16Q62247 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC9.41□□□□□ -0.9
Sox16Q62247 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC9.41□□□□□ -0.9
Sox16Q62247 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sox16Q62247 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Sox16Q62247 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sox16Q62247 Gm43072-201ENSMUST00000200283 1671 ntBASIC9.41□□□□□ -0.9
Sox16Q62247 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.41□□□□□ -0.9
Sox16Q62247 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC9.41□□□□□ -0.9
Sox16Q62247 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox16Q62247 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sox16Q62247 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC9.4□□□□□ -0.9
Sox16Q62247 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC9.4□□□□□ -0.9
Sox16Q62247 AC155298.2-201ENSMUST00000225485 6226 ntBASIC9.4□□□□□ -0.9
Sox16Q62247 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Sox16Q62247 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sox16Q62247 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Sox16Q62247 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.91
Sox16Q62247 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.4□□□□□ -0.91
Sox16Q62247 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sox16Q62247 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Sox16Q62247 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC9.4□□□□□ -0.91
Sox16Q62247 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sox16Q62247 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Sox16Q62247 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Sox16Q62247 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Sox16Q62247 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Sox16Q62247 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC9.39□□□□□ -0.91
Sox16Q62247 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sox16Q62247 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Sox16Q62247 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC9.39□□□□□ -0.91
Sox16Q62247 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms