Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Gm37025-201ENSMUST00000195159 829 ntBASIC15.3■□□□□ 0.04
Clcn4Q61418 Gm21814-202ENSMUST00000203277 873 ntBASIC15.3■□□□□ 0.04
Clcn4Q61418 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Clcn4Q61418 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.3■□□□□ 0.04
Clcn4Q61418 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Clcn4Q61418 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Clcn4Q61418 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn4Q61418 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Clcn4Q61418 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Clcn4Q61418 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clcn4Q61418 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.29■□□□□ 0.04
Clcn4Q61418 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.29■□□□□ 0.04
Clcn4Q61418 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.29■□□□□ 0.04
Clcn4Q61418 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.29■□□□□ 0.04
Clcn4Q61418 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn4Q61418 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Clcn4Q61418 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.28■□□□□ 0.04
Clcn4Q61418 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Clcn4Q61418 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Clcn4Q61418 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Clcn4Q61418 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.28■□□□□ 0.04
Clcn4Q61418 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn4Q61418 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn4Q61418 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Clcn4Q61418 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Clcn4Q61418 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.27■□□□□ 0.04
Clcn4Q61418 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.27■□□□□ 0.04
Clcn4Q61418 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Clcn4Q61418 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Clcn4Q61418 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn4Q61418 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
Clcn4Q61418 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn4Q61418 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn4Q61418 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn4Q61418 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn4Q61418 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn4Q61418 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn4Q61418 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn4Q61418 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn4Q61418 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Clcn4Q61418 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn4Q61418 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.27■□□□□ 0.03
Clcn4Q61418 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn4Q61418 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Clcn4Q61418 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn4Q61418 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn4Q61418 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn4Q61418 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn4Q61418 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn4Q61418 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn4Q61418 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn4Q61418 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.26■□□□□ 0.03
Clcn4Q61418 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.26■□□□□ 0.03
Clcn4Q61418 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.26■□□□□ 0.03
Clcn4Q61418 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.26■□□□□ 0.03
Clcn4Q61418 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn4Q61418 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms