Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Olfr129-201ENSMUST00000122318 993 ntBASIC19.92■□□□□ 0.78
Vps54Q5SPW0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Ank2-226ENSMUST00000189368 339 ntBASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Gm45328-201ENSMUST00000210942 917 ntBASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.92■□□□□ 0.78
Vps54Q5SPW0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Gm27742-201ENSMUST00000184667 60 ntBASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps54Q5SPW0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps54Q5SPW0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.9■□□□□ 0.78
Vps54Q5SPW0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Vps54Q5SPW0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Vps54Q5SPW0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.89■□□□□ 0.77
Vps54Q5SPW0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Vps54Q5SPW0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps54Q5SPW0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps54Q5SPW0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms