Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-3Q5R1C3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Gm13146-201ENSMUST00000118508 780 ntBASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-3Q5R1C3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms