Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Gm8396-201ENSMUST00000057361 823 ntBASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.61■□□□□ 0.25
Fam196aQ3USH1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Fam196aQ3USH1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Fam196aQ3USH1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fam196aQ3USH1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fam196aQ3USH1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fam196aQ3USH1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fam196aQ3USH1 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.58■□□□□ 0.24
Fam196aQ3USH1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.58■□□□□ 0.24
Fam196aQ3USH1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fam196aQ3USH1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fam196aQ3USH1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Fam196aQ3USH1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fam196aQ3USH1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Fam196aQ3USH1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fam196aQ3USH1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fam196aQ3USH1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fam196aQ3USH1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Gm17271-201ENSMUST00000165535 355 ntBASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fam196aQ3USH1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Fam196aQ3USH1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Fam196aQ3USH1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fam196aQ3USH1 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms