Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.3■□□□□ 0.04
Col10a1Q05306 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col10a1Q05306 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col10a1Q05306 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col10a1Q05306 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.29■□□□□ 0.04
Col10a1Q05306 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col10a1Q05306 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.29■□□□□ 0.04
Col10a1Q05306 Gm18115-201ENSMUST00000221209 621 ntBASIC15.29■□□□□ 0.04
Col10a1Q05306 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col10a1Q05306 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col10a1Q05306 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.28■□□□□ 0.04
Col10a1Q05306 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Gm11336-201ENSMUST00000118168 334 ntBASIC15.28■□□□□ 0.04
Col10a1Q05306 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.28■□□□□ 0.04
Col10a1Q05306 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.28■□□□□ 0.04
Col10a1Q05306 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col10a1Q05306 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Col10a1Q05306 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col10a1Q05306 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col10a1Q05306 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col10a1Q05306 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col10a1Q05306 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.27■□□□□ 0.04
Col10a1Q05306 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col10a1Q05306 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col10a1Q05306 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col10a1Q05306 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col10a1Q05306 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col10a1Q05306 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col10a1Q05306 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col10a1Q05306 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col10a1Q05306 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col10a1Q05306 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col10a1Q05306 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col10a1Q05306 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col10a1Q05306 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.27■□□□□ 0.03
Col10a1Q05306 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col10a1Q05306 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col10a1Q05306 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col10a1Q05306 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms