Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sec61a1P61620 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sec61a1P61620 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sec61a1P61620 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Sec61a1P61620 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.63□□□□□ -0.07
Sec61a1P61620 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.63□□□□□ -0.07
Sec61a1P61620 Mir8112-201ENSMUST00000184382 131 ntBASIC14.63□□□□□ -0.07
Sec61a1P61620 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.63□□□□□ -0.07
Sec61a1P61620 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sec61a1P61620 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sec61a1P61620 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sec61a1P61620 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.62□□□□□ -0.07
Sec61a1P61620 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.62□□□□□ -0.07
Sec61a1P61620 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sec61a1P61620 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sec61a1P61620 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Sec61a1P61620 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sec61a1P61620 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.62□□□□□ -0.07
Sec61a1P61620 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sec61a1P61620 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.61□□□□□ -0.07
Sec61a1P61620 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sec61a1P61620 Gm5417-201ENSMUST00000079706 384 ntBASIC14.61□□□□□ -0.07
Sec61a1P61620 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sec61a1P61620 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sec61a1P61620 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sec61a1P61620 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sec61a1P61620 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sec61a1P61620 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sec61a1P61620 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61a1P61620 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.6□□□□□ -0.07
Sec61a1P61620 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Sec61a1P61620 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.6□□□□□ -0.07
Sec61a1P61620 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.6□□□□□ -0.07
Sec61a1P61620 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sec61a1P61620 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.6□□□□□ -0.07
Sec61a1P61620 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms