Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sssca1P56873 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.45□□□□□ -0.26
Sssca1P56873 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.45□□□□□ -0.26
Sssca1P56873 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Gm37179-201ENSMUST00000194862 823 ntBASIC13.45□□□□□ -0.26
Sssca1P56873 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sssca1P56873 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sssca1P56873 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.45□□□□□ -0.26
Sssca1P56873 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sssca1P56873 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Sssca1P56873 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sssca1P56873 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sssca1P56873 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.44□□□□□ -0.26
Sssca1P56873 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sssca1P56873 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sssca1P56873 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
Sssca1P56873 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sssca1P56873 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.43□□□□□ -0.26
Sssca1P56873 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Gm37292-201ENSMUST00000192062 758 ntBASIC13.43□□□□□ -0.26
Sssca1P56873 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.43□□□□□ -0.26
Sssca1P56873 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sssca1P56873 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sssca1P56873 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.43□□□□□ -0.26
Sssca1P56873 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sssca1P56873 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sssca1P56873 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.42□□□□□ -0.26
Sssca1P56873 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sssca1P56873 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Sssca1P56873 Gm37025-201ENSMUST00000195159 829 ntBASIC13.42□□□□□ -0.26
Sssca1P56873 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.42□□□□□ -0.26
Sssca1P56873 Gm10602-201ENSMUST00000098239 609 ntBASIC13.42□□□□□ -0.26
Sssca1P56873 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.42□□□□□ -0.26
Sssca1P56873 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sssca1P56873 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Sssca1P56873 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.41□□□□□ -0.26
Sssca1P56873 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Sssca1P56873 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms