Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Hnf4aP49698 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Hnf4aP49698 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.06■□□□□ 0.16
Hnf4aP49698 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Gm2274-201ENSMUST00000184539 609 ntBASIC16.06■□□□□ 0.16
Hnf4aP49698 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.06■□□□□ 0.16
Hnf4aP49698 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hnf4aP49698 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Hnf4aP49698 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hnf4aP49698 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.05■□□□□ 0.16
Hnf4aP49698 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Gm13474-201ENSMUST00000122466 815 ntBASIC16.05■□□□□ 0.16
Hnf4aP49698 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.05■□□□□ 0.16
Hnf4aP49698 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Hnf4aP49698 Gm10252-201ENSMUST00000209541 832 ntBASIC16.05■□□□□ 0.16
Hnf4aP49698 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Hnf4aP49698 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Hnf4aP49698 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.05■□□□□ 0.16
Hnf4aP49698 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Hnf4aP49698 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hnf4aP49698 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Hnf4aP49698 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.04■□□□□ 0.16
Hnf4aP49698 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.04■□□□□ 0.16
Hnf4aP49698 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hnf4aP49698 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.04■□□□□ 0.16
Hnf4aP49698 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.04■□□□□ 0.16
Hnf4aP49698 Gm16061-201ENSMUST00000122167 857 ntBASIC16.04■□□□□ 0.16
Hnf4aP49698 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Hnf4aP49698 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hnf4aP49698 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hnf4aP49698 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hnf4aP49698 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hnf4aP49698 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hnf4aP49698 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.03■□□□□ 0.16
Hnf4aP49698 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hnf4aP49698 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hnf4aP49698 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hnf4aP49698 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Hnf4aP49698 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hnf4aP49698 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hnf4aP49698 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hnf4aP49698 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hnf4aP49698 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Hnf4aP49698 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms