Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sdc2P43407 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Sdc2P43407 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sdc2P43407 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sdc2P43407 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.62■□□□□ 0.57
Sdc2P43407 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.62■□□□□ 0.57
Sdc2P43407 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.62■□□□□ 0.57
Sdc2P43407 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 Odf3b-204ENSMUST00000227834 930 ntBASIC18.62■□□□□ 0.57
Sdc2P43407 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Sdc2P43407 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.62■□□□□ 0.57
Sdc2P43407 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc2P43407 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.61■□□□□ 0.57
Sdc2P43407 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.61■□□□□ 0.57
Sdc2P43407 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Gm3375-201ENSMUST00000203929 796 ntBASIC18.61■□□□□ 0.57
Sdc2P43407 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Sdc2P43407 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc2P43407 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sdc2P43407 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Sdc2P43407 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc2P43407 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sdc2P43407 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc2P43407 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc2P43407 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.6■□□□□ 0.57
Sdc2P43407 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc2P43407 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc2P43407 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc2P43407 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc2P43407 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sdc2P43407 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.59■□□□□ 0.57
Sdc2P43407 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.59■□□□□ 0.57
Sdc2P43407 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sdc2P43407 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.59■□□□□ 0.57
Sdc2P43407 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sdc2P43407 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sdc2P43407 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sdc2P43407 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Sdc2P43407 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc2P43407 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.59■□□□□ 0.57
Sdc2P43407 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms