Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox5P35710 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sox5P35710 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Sox5P35710 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Gm7791-201ENSMUST00000219066 539 ntBASIC18.12■□□□□ 0.49
Sox5P35710 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.12■□□□□ 0.49
Sox5P35710 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox5P35710 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Sox5P35710 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.11■□□□□ 0.49
Sox5P35710 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox5P35710 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Sox5P35710 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.1■□□□□ 0.49
Sox5P35710 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.1■□□□□ 0.49
Sox5P35710 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sox5P35710 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.1■□□□□ 0.49
Sox5P35710 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.1■□□□□ 0.49
Sox5P35710 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.1■□□□□ 0.49
Sox5P35710 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sox5P35710 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox5P35710 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sox5P35710 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.1■□□□□ 0.49
Sox5P35710 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sox5P35710 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sox5P35710 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.09■□□□□ 0.49
Sox5P35710 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sox5P35710 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.09■□□□□ 0.49
Sox5P35710 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sox5P35710 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox5P35710 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sox5P35710 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sox5P35710 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.09■□□□□ 0.49
Sox5P35710 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox5P35710 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox5P35710 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox5P35710 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.08■□□□□ 0.49
Sox5P35710 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Sox5P35710 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sox5P35710 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.08■□□□□ 0.49
Sox5P35710 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox5P35710 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sox5P35710 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.08■□□□□ 0.48
Sox5P35710 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms