Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Thbs1P35441 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Thbs1P35441 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Thbs1P35441 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Thbs1P35441 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Thbs1P35441 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Thbs1P35441 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.33■□□□□ 0.04
Thbs1P35441 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Thbs1P35441 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.33■□□□□ 0.04
Thbs1P35441 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.33■□□□□ 0.04
Thbs1P35441 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.33■□□□□ 0.04
Thbs1P35441 Gm18115-201ENSMUST00000221209 621 ntBASIC15.33■□□□□ 0.04
Thbs1P35441 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Gm9987-201ENSMUST00000069768 567 ntBASIC15.33■□□□□ 0.04
Thbs1P35441 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Thbs1P35441 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Thbs1P35441 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.33■□□□□ 0.04
Thbs1P35441 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thbs1P35441 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Thbs1P35441 Actl10-202ENSMUST00000226583 1501 ntBASIC15.33■□□□□ 0.04
Thbs1P35441 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Thbs1P35441 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Thbs1P35441 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Gm6433-201ENSMUST00000118634 875 ntBASIC15.32■□□□□ 0.04
Thbs1P35441 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.32■□□□□ 0.04
Thbs1P35441 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Thbs1P35441 Gm2274-201ENSMUST00000184539 609 ntBASIC15.32■□□□□ 0.04
Thbs1P35441 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.32■□□□□ 0.04
Thbs1P35441 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Thbs1P35441 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Thbs1P35441 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Thbs1P35441 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Thbs1P35441 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.32■□□□□ 0.04
Thbs1P35441 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Thbs1P35441 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Thbs1P35441 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Thbs1P35441 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Thbs1P35441 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Thbs1P35441 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Thbs1P35441 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.31■□□□□ 0.04
Thbs1P35441 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Thbs1P35441 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Thbs1P35441 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.31■□□□□ 0.04
Thbs1P35441 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Thbs1P35441 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Thbs1P35441 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.3■□□□□ 0.04
Thbs1P35441 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Thbs1P35441 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms