Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.03■□□□□ 0.32
Nfkb1P25799 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.03■□□□□ 0.32
Nfkb1P25799 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.03■□□□□ 0.32
Nfkb1P25799 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Nfkb1P25799 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nfkb1P25799 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Nfkb1P25799 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Nfkb1P25799 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.02■□□□□ 0.32
Nfkb1P25799 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nfkb1P25799 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nfkb1P25799 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.02■□□□□ 0.31
Nfkb1P25799 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Nfkb1P25799 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Nfkb1P25799 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nfkb1P25799 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nfkb1P25799 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nfkb1P25799 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.02■□□□□ 0.31
Nfkb1P25799 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nfkb1P25799 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Nfkb1P25799 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.01■□□□□ 0.31
Nfkb1P25799 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Nfkb1P25799 Gm24589-201ENSMUST00000116692 94 ntBASIC17.01■□□□□ 0.31
Nfkb1P25799 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.01■□□□□ 0.31
Nfkb1P25799 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.01■□□□□ 0.31
Nfkb1P25799 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Nfkb1P25799 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Nfkb1P25799 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.01■□□□□ 0.31
Nfkb1P25799 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Nfkb1P25799 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nfkb1P25799 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17■□□□□ 0.31
Nfkb1P25799 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17■□□□□ 0.31
Nfkb1P25799 Gm7461-201ENSMUST00000058918 827 ntBASIC17■□□□□ 0.31
Nfkb1P25799 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Nfkb1P25799 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nfkb1P25799 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nfkb1P25799 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Nfkb1P25799 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nfkb1P25799 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.99■□□□□ 0.31
Nfkb1P25799 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.99■□□□□ 0.31
Nfkb1P25799 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nfkb1P25799 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nfkb1P25799 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nfkb1P25799 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nfkb1P25799 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nfkb1P25799 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nfkb1P25799 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nfkb1P25799 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.98■□□□□ 0.31
Nfkb1P25799 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nfkb1P25799 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nfkb1P25799 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms