Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NeflP08551 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NeflP08551 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
NeflP08551 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NeflP08551 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.61■■□□□ 1.05
NeflP08551 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC21.61■■□□□ 1.05
NeflP08551 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NeflP08551 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.61■■□□□ 1.05
NeflP08551 Gm37179-201ENSMUST00000194862 823 ntBASIC21.61■■□□□ 1.05
NeflP08551 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.61■■□□□ 1.05
NeflP08551 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NeflP08551 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NeflP08551 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.61■■□□□ 1.05
NeflP08551 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NeflP08551 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
NeflP08551 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.6■■□□□ 1.05
NeflP08551 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
NeflP08551 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NeflP08551 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Dancr-204ENSMUST00000132389 2347 ntBASIC21.6■■□□□ 1.05
NeflP08551 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NeflP08551 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
NeflP08551 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.6■■□□□ 1.05
NeflP08551 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.6■■□□□ 1.05
NeflP08551 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NeflP08551 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NeflP08551 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NeflP08551 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NeflP08551 Gm24841-201ENSMUST00000158676 357 ntBASIC21.59■■□□□ 1.05
NeflP08551 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NeflP08551 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NeflP08551 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NeflP08551 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NeflP08551 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NeflP08551 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
NeflP08551 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NeflP08551 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.59■■□□□ 1.05
NeflP08551 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NeflP08551 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.58■■□□□ 1.05
NeflP08551 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
NeflP08551 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
NeflP08551 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NeflP08551 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
NeflP08551 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NeflP08551 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
NeflP08551 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NeflP08551 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NeflP08551 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NeflP08551 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NeflP08551 Gm10602-201ENSMUST00000098239 609 ntBASIC21.58■■□□□ 1.05
NeflP08551 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NeflP08551 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
NeflP08551 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NeflP08551 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NeflP08551 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NeflP08551 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NeflP08551 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
NeflP08551 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
NeflP08551 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NeflP08551 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NeflP08551 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.57■■□□□ 1.04
NeflP08551 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NeflP08551 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NeflP08551 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms