Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.07■□□□□ 0
Pdlim3O70209 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pdlim3O70209 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.07■□□□□ 0
Pdlim3O70209 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.07■□□□□ 0
Pdlim3O70209 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pdlim3O70209 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim3O70209 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.06■□□□□ 0
Pdlim3O70209 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Pdlim3O70209 Gm27000-201ENSMUST00000182943 842 ntBASIC15.06■□□□□ 0
Pdlim3O70209 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.06■□□□□ 0
Pdlim3O70209 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim3O70209 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pdlim3O70209 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pdlim3O70209 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim3O70209 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pdlim3O70209 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pdlim3O70209 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim3O70209 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim3O70209 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pdlim3O70209 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim3O70209 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Pdlim3O70209 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Pdlim3O70209 Gm27275-201ENSMUST00000184318 272 ntBASIC15.05■□□□□ -0
Pdlim3O70209 Gm43183-201ENSMUST00000200632 547 ntBASIC15.05■□□□□ -0
Pdlim3O70209 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.05■□□□□ -0
Pdlim3O70209 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.05■□□□□ -0
Pdlim3O70209 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim3O70209 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim3O70209 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim3O70209 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pdlim3O70209 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pdlim3O70209 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim3O70209 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim3O70209 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.05■□□□□ -0
Pdlim3O70209 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Pdlim3O70209 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim3O70209 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim3O70209 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim3O70209 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pdlim3O70209 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pdlim3O70209 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.04■□□□□ -0
Pdlim3O70209 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.04■□□□□ -0
Pdlim3O70209 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pdlim3O70209 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.04■□□□□ -0
Pdlim3O70209 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim3O70209 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Pdlim3O70209 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pdlim3O70209 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pdlim3O70209 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms