Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
DffbO54788 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DffbO54788 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DffbO54788 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DffbO54788 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DffbO54788 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
DffbO54788 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DffbO54788 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
DffbO54788 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.27□□□□□ -0.12
DffbO54788 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DffbO54788 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
DffbO54788 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DffbO54788 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.27□□□□□ -0.12
DffbO54788 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DffbO54788 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.27□□□□□ -0.13
DffbO54788 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.27□□□□□ -0.13
DffbO54788 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.27□□□□□ -0.13
DffbO54788 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.27□□□□□ -0.13
DffbO54788 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
DffbO54788 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
DffbO54788 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DffbO54788 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DffbO54788 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DffbO54788 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DffbO54788 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
DffbO54788 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DffbO54788 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Gm17661-201ENSMUST00000170317 270 ntBASIC14.26□□□□□ -0.13
DffbO54788 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.26□□□□□ -0.13
DffbO54788 Gm18666-201ENSMUST00000190039 958 ntBASIC14.26□□□□□ -0.13
DffbO54788 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DffbO54788 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
DffbO54788 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DffbO54788 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
DffbO54788 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
DffbO54788 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
DffbO54788 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.25□□□□□ -0.13
DffbO54788 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DffbO54788 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
DffbO54788 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Gm12441-201ENSMUST00000121806 588 ntBASIC14.25□□□□□ -0.13
DffbO54788 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.25□□□□□ -0.13
DffbO54788 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.25□□□□□ -0.13
DffbO54788 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DffbO54788 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DffbO54788 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DffbO54788 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.24□□□□□ -0.13
DffbO54788 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
DffbO54788 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
DffbO54788 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
DffbO54788 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.24□□□□□ -0.13
DffbO54788 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.24□□□□□ -0.13
DffbO54788 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.24□□□□□ -0.13
DffbO54788 Gm37856-201ENSMUST00000191634 999 ntBASIC14.24□□□□□ -0.13
DffbO54788 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.24□□□□□ -0.13
DffbO54788 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
DffbO54788 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.24□□□□□ -0.13
DffbO54788 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DffbO54788 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
DffbO54788 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms