Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndufb11O09111 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ndufb11O09111 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ndufb11O09111 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndufb11O09111 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.37□□□□□ -0.27
Ndufb11O09111 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ndufb11O09111 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndufb11O09111 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndufb11O09111 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndufb11O09111 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.37□□□□□ -0.27
Ndufb11O09111 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ndufb11O09111 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ndufb11O09111 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ndufb11O09111 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ndufb11O09111 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ndufb11O09111 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.36□□□□□ -0.27
Ndufb11O09111 Gm38205-201ENSMUST00000192243 258 ntBASIC13.36□□□□□ -0.27
Ndufb11O09111 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndufb11O09111 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.35□□□□□ -0.27
Ndufb11O09111 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.35□□□□□ -0.27
Ndufb11O09111 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Ndufb11O09111 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.35□□□□□ -0.27
Ndufb11O09111 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Gm11175-201ENSMUST00000116172 543 ntBASIC13.35□□□□□ -0.27
Ndufb11O09111 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.35□□□□□ -0.27
Ndufb11O09111 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.35□□□□□ -0.27
Ndufb11O09111 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ndufb11O09111 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndufb11O09111 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ndufb11O09111 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ndufb11O09111 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.34□□□□□ -0.27
Ndufb11O09111 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Ndufb11O09111 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Gm10418-201ENSMUST00000100943 576 ntBASIC13.34□□□□□ -0.27
Ndufb11O09111 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.34□□□□□ -0.27
Ndufb11O09111 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ndufb11O09111 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ndufb11O09111 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Ndufb11O09111 Sybu-209ENSMUST00000228639 4113 ntBASIC13.34□□□□□ -0.27
Ndufb11O09111 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ndufb11O09111 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ndufb11O09111 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndufb11O09111 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms