Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm11236J3QMS7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Gm18206-201ENSMUST00000207027 926 ntBASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11236J3QMS7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm11236J3QMS7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Mir5131-201ENSMUST00000175426 93 ntBASIC17.27■□□□□ 0.36
Gm11236J3QMS7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.27■□□□□ 0.36
Gm11236J3QMS7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11236J3QMS7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11236J3QMS7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11236J3QMS7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11236J3QMS7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.27■□□□□ 0.35
Gm11236J3QMS7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11236J3QMS7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11236J3QMS7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Gm1401-201ENSMUST00000122048 772 ntBASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.26■□□□□ 0.35
Gm11236J3QMS7 Gm7506-201ENSMUST00000207758 815 ntBASIC17.26■□□□□ 0.35
Gm11236J3QMS7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms