Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav13d-3J3QMG8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.58□□□□□ -0.07
Trav13d-3J3QMG8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13d-3J3QMG8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13d-3J3QMG8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Trav13d-3J3QMG8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13d-3J3QMG8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Gm26039-201ENSMUST00000158152 144 ntBASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Gm44450-201ENSMUST00000199528 114 ntBASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-3J3QMG8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Gm9987-201ENSMUST00000069768 567 ntBASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-3J3QMG8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Gm11336-201ENSMUST00000118168 334 ntBASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms