Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh1F7BJK1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Pcdh1F7BJK1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Pcdh1F7BJK1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh1F7BJK1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Pcdh1F7BJK1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh1F7BJK1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh1F7BJK1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Gm43183-201ENSMUST00000200632 547 ntBASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh1F7BJK1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh1F7BJK1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms